Publications ::

Publications...

(more to come...)

papers:


Xiaohui Xie , Paul Rigor , and Pierre Baldi. "MotifMap: a human genome-wide map of candidate regulatory motif sites." Bioinformatics, 15 January 2009; 25: 167 - 174.

E. Linstead, S. Bajracharya, T. Ngo, P. Rigor, C. Lopes, P. Baldi. Sourcerer: Mining and Searching Internet-Scale Software Repositories. Data Mining and Knowledge Discovery. (2008, in press)

Erik Linstead, Paul Rigor, Sushil Bajracharya, Cristina Lopes, Pierre Baldi, "Mining Internet-Scale Software Repositories." Advances in Neural Information Processing Systems (NIPS 2007) December 2007.

Erik Linstead, Paul Rigor, Sushil Bajracharya, Cristina Lopes, Pierre Baldi, "Mining Concepts from Code with Probabilistic Topic Models." Proceedings of ASE 2007: International Conference on Automated Software Engineering , Atlanta, GA, Nov 5-9, 2007.

Erik Linstead, Paul Rigor, Sushil Bajracharya, Cristina Lopes, Pierre Baldi, "Mining Eclipse Developer Contributions via Author-Topic Models." Proceedings of MSR 2007: International Workshop on Mining Software Repositories , Minneapolis, MN, May 19-20, 2007. (Voted best paper, MSR "Scale" Challenge)

posters:


Kenneth M. Daily, Paul Rigor, Scott Christley, Xiaohui Xie, Pierre Baldi. Data Structures and Compression Algorithms for High-Throughput Sequencing Technologies. ISMB/ECCB July 2009.

Sushil Bajracharya, Trung Ngo, Erik Linstead, Yimeng Dou, Paul Rigor, Pierre Baldi, Cristina Lopes. Sourcerer: A Search Engine for Open Source Code Supporting Structure­based Search. In Companion to the 21st ACM SIGPLAN conference on Object­oriented programming languages, systems, and applications OOPSLA '06. October 2006. ACM Press

technical reports:


Sushil Bajracharya, Trung Ngo, Erik Linstead, Paul Rigor, Yimeng Dou, Pierre Baldi, Cristina Lopes (2007). "A Study of Ranking Schemes in Internet-Scale Code Search." UC Irvine, Institute for Software Research, UCI-ISR-07-8.

© 2006-2009 Paul Rigor | May the source be with you