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AGNS: Arabidopsis GeneNet Supplementary Database
ChemDB: Database of molecular compounds for chemical informatics, in silico synthesis, docking, and virtual screening.
ICBS: Database of protein-protein interactions mediated by inter-chain beta sheets.
GOnet:

Yeast database and visualization tool combining gene (SGD), gene ontology (GO), and gene interaction information (GRID).

MITOMAP: Human mitochondrial genome database.
PPDB: Poxvirus proteomics database (formerly VACDB).
Hydra EST Database: This website contains a variety of datasets, analyses, and resources pertaining to the Hydra EST Project.
Sigmoid Database: Database for molecular interactions and pathways (Systems Biology).

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