DNA Microarrays
| Cyber-T: | Software and server for analysis of DNA microarray data (differential expression). |
| E. coli data set: | Highly replicated (x32) E. coli data sets. |
Regulatory Genomics
| MotifMap: | Software and server for mapping and analyzing regulatory motifs and networks. |
Sequence Analysis Tools
| HMMpro: | Hidden Markov Model simulator for biological sequence analysis and multiple alignments with graphical interface. |
| GWAP | Genome Wide Automated determination of Primers. |
| MutantDesign_111106 | Restriction enzyme / codon optimization for mutant protein design. |
High-Throughput Sequencing
| HTS | High-Throughput Sequencer, data is managed, analyzed and stored with the IGB. |
Comparative Genomics
| LineUp: | Comparative genomic analysis (detection of homologous chromosomal regions). |